Protein–RNA interactions for Protein: P15314

Irf1, Interferon regulatory factor 1, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf1P15314 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.03■□□□□ 0.64
Irf1P15314 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.03■□□□□ 0.64
Irf1P15314 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.03■□□□□ 0.64
Irf1P15314 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Irf1P15314 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Irf1P15314 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Irf1P15314 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Irf1P15314 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Irf1P15314 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.02■□□□□ 0.64
Irf1P15314 Gm40881-201ENSMUST00000223397 166 ntBASIC19.02■□□□□ 0.64
Irf1P15314 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf1P15314 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Irf1P15314 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.02■□□□□ 0.64
Irf1P15314 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Irf1P15314 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Irf1P15314 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Irf1P15314 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Irf1P15314 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf1P15314 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf1P15314 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Irf1P15314 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf1P15314 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf1P15314 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf1P15314 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Irf1P15314 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Irf1P15314 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Irf1P15314 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf1P15314 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf1P15314 Gm10399-202ENSMUST00000202768 748 ntBASIC19■□□□□ 0.63
Irf1P15314 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf1P15314 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf1P15314 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf1P15314 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19■□□□□ 0.63
Irf1P15314 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19■□□□□ 0.63
Irf1P15314 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Irf1P15314 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Irf1P15314 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.99■□□□□ 0.63
Irf1P15314 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Irf1P15314 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Irf1P15314 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Irf1P15314 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Irf1P15314 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Irf1P15314 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Irf1P15314 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Irf1P15314 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.98■□□□□ 0.63
Irf1P15314 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.98■□□□□ 0.63
Irf1P15314 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Irf1P15314 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.98■□□□□ 0.63
Irf1P15314 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.98■□□□□ 0.63
Irf1P15314 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Irf1P15314 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf1P15314 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.97■□□□□ 0.63
Irf1P15314 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf1P15314 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf1P15314 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf1P15314 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf1P15314 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Irf1P15314 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.97■□□□□ 0.63
Irf1P15314 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Irf1P15314 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.97■□□□□ 0.63
Irf1P15314 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.97■□□□□ 0.63
Irf1P15314 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.96■□□□□ 0.63
Irf1P15314 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Irf1P15314 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Irf1P15314 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Irf1P15314 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Irf1P15314 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.96■□□□□ 0.63
Irf1P15314 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Irf1P15314 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Irf1P15314 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf1P15314 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Irf1P15314 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.95■□□□□ 0.62
Irf1P15314 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Irf1P15314 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.95■□□□□ 0.62
Irf1P15314 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf1P15314 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf1P15314 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf1P15314 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf1P15314 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf1P15314 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Irf1P15314 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Irf1P15314 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf1P15314 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf1P15314 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf1P15314 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Irf1P15314 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
Irf1P15314 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Irf1P15314 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf1P15314 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf1P15314 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Irf1P15314 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Irf1P15314 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irf1P15314 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irf1P15314 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irf1P15314 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irf1P15314 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.93■□□□□ 0.62
Irf1P15314 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.93■□□□□ 0.62
Irf1P15314 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irf1P15314 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Irf1P15314 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms