Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctla2aP12399 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctla2aP12399 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ctla2aP12399 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctla2aP12399 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ctla2aP12399 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ctla2aP12399 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ctla2aP12399 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ctla2aP12399 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctla2aP12399 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ctla2aP12399 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctla2aP12399 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctla2aP12399 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ctla2aP12399 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctla2aP12399 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ctla2aP12399 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ctla2aP12399 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctla2aP12399 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctla2aP12399 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.66■□□□□ 0.58
Ctla2aP12399 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctla2aP12399 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctla2aP12399 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.66■□□□□ 0.58
Ctla2aP12399 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ctla2aP12399 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ctla2aP12399 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctla2aP12399 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.66■□□□□ 0.58
Ctla2aP12399 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctla2aP12399 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ctla2aP12399 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctla2aP12399 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctla2aP12399 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.65■□□□□ 0.58
Ctla2aP12399 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctla2aP12399 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctla2aP12399 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ctla2aP12399 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ctla2aP12399 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ctla2aP12399 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Ctla2aP12399 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ctla2aP12399 Gm6821-201ENSMUST00000107540 542 ntBASIC18.64■□□□□ 0.57
Ctla2aP12399 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ctla2aP12399 Terc-201ENSMUST00000082862 423 ntBASIC18.64■□□□□ 0.57
Ctla2aP12399 Gm4799-201ENSMUST00000095396 657 ntBASIC18.64■□□□□ 0.57
Ctla2aP12399 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctla2aP12399 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ctla2aP12399 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.64■□□□□ 0.57
Ctla2aP12399 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.63■□□□□ 0.57
Ctla2aP12399 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ctla2aP12399 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctla2aP12399 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.63■□□□□ 0.57
Ctla2aP12399 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctla2aP12399 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctla2aP12399 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctla2aP12399 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctla2aP12399 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctla2aP12399 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctla2aP12399 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ctla2aP12399 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.62■□□□□ 0.57
Ctla2aP12399 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ctla2aP12399 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctla2aP12399 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ctla2aP12399 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ctla2aP12399 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.61■□□□□ 0.57
Ctla2aP12399 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ctla2aP12399 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctla2aP12399 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctla2aP12399 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ctla2aP12399 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ctla2aP12399 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ctla2aP12399 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctla2aP12399 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ctla2aP12399 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctla2aP12399 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
Ctla2aP12399 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctla2aP12399 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctla2aP12399 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctla2aP12399 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctla2aP12399 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ctla2aP12399 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ctla2aP12399 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.59■□□□□ 0.57
Ctla2aP12399 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla2aP12399 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla2aP12399 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.59■□□□□ 0.57
Ctla2aP12399 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla2aP12399 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla2aP12399 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla2aP12399 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla2aP12399 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.59■□□□□ 0.57
Ctla2aP12399 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.59■□□□□ 0.57
Ctla2aP12399 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ctla2aP12399 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ctla2aP12399 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ctla2aP12399 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.58■□□□□ 0.57
Ctla2aP12399 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ctla2aP12399 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ctla2aP12399 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ctla2aP12399 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ctla2aP12399 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ctla2aP12399 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ctla2aP12399 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ctla2aP12399 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms