Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smim1P0C8K7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Smim1P0C8K7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim1P0C8K7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim1P0C8K7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim1P0C8K7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim1P0C8K7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim1P0C8K7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.35□□□□□ -0.11
Smim1P0C8K7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Smim1P0C8K7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim1P0C8K7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim1P0C8K7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim1P0C8K7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smim1P0C8K7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim1P0C8K7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim1P0C8K7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim1P0C8K7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim1P0C8K7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Smim1P0C8K7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim1P0C8K7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim1P0C8K7 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.34□□□□□ -0.11
Smim1P0C8K7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smim1P0C8K7 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim1P0C8K7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.34□□□□□ -0.11
Smim1P0C8K7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Smim1P0C8K7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim1P0C8K7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smim1P0C8K7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smim1P0C8K7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Smim1P0C8K7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smim1P0C8K7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Smim1P0C8K7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim1P0C8K7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Smim1P0C8K7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smim1P0C8K7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smim1P0C8K7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Smim1P0C8K7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Smim1P0C8K7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Smim1P0C8K7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim1P0C8K7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim1P0C8K7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smim1P0C8K7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim1P0C8K7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.32□□□□□ -0.12
Smim1P0C8K7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim1P0C8K7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Smim1P0C8K7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim1P0C8K7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smim1P0C8K7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim1P0C8K7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smim1P0C8K7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim1P0C8K7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim1P0C8K7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim1P0C8K7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim1P0C8K7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Smim1P0C8K7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim1P0C8K7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim1P0C8K7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim1P0C8K7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim1P0C8K7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim1P0C8K7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim1P0C8K7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smim1P0C8K7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smim1P0C8K7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC14.31□□□□□ -0.12
Smim1P0C8K7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smim1P0C8K7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smim1P0C8K7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.3□□□□□ -0.12
Smim1P0C8K7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim1P0C8K7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim1P0C8K7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim1P0C8K7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim1P0C8K7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim1P0C8K7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.3□□□□□ -0.12
Smim1P0C8K7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smim1P0C8K7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim1P0C8K7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smim1P0C8K7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim1P0C8K7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smim1P0C8K7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smim1P0C8K7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.29□□□□□ -0.12
Smim1P0C8K7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smim1P0C8K7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Smim1P0C8K7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim1P0C8K7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim1P0C8K7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim1P0C8K7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.29□□□□□ -0.12
Smim1P0C8K7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smim1P0C8K7 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.29□□□□□ -0.12
Smim1P0C8K7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smim1P0C8K7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim1P0C8K7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim1P0C8K7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim1P0C8K7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.28□□□□□ -0.12
Smim1P0C8K7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smim1P0C8K7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim1P0C8K7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smim1P0C8K7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim1P0C8K7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim1P0C8K7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smim1P0C8K7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
Smim1P0C8K7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms