Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxa9P09631 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hoxa9P09631 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxa9P09631 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Hoxa9P09631 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
Hoxa9P09631 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.97■□□□□ 0.95
Hoxa9P09631 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Hoxa9P09631 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxa9P09631 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxa9P09631 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxa9P09631 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.97■□□□□ 0.95
Hoxa9P09631 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxa9P09631 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hoxa9P09631 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxa9P09631 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxa9P09631 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.96■□□□□ 0.95
Hoxa9P09631 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxa9P09631 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Hoxa9P09631 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.96■□□□□ 0.95
Hoxa9P09631 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.96■□□□□ 0.95
Hoxa9P09631 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Hoxa9P09631 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.96■□□□□ 0.95
Hoxa9P09631 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Hoxa9P09631 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxa9P09631 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hoxa9P09631 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxa9P09631 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxa9P09631 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxa9P09631 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Hoxa9P09631 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.95■□□□□ 0.94
Hoxa9P09631 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.95■□□□□ 0.94
Hoxa9P09631 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxa9P09631 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxa9P09631 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hoxa9P09631 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxa9P09631 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxa9P09631 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Hoxa9P09631 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.94■□□□□ 0.94
Hoxa9P09631 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxa9P09631 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxa9P09631 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxa9P09631 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxa9P09631 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hoxa9P09631 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxa9P09631 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxa9P09631 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxa9P09631 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.93■□□□□ 0.94
Hoxa9P09631 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxa9P09631 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxa9P09631 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Hoxa9P09631 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxa9P09631 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hoxa9P09631 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Hoxa9P09631 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.92■□□□□ 0.94
Hoxa9P09631 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxa9P09631 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.92■□□□□ 0.94
Hoxa9P09631 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Hoxa9P09631 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxa9P09631 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hoxa9P09631 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxa9P09631 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxa9P09631 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxa9P09631 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Hoxa9P09631 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Hoxa9P09631 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxa9P09631 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxa9P09631 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hoxa9P09631 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
Hoxa9P09631 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxa9P09631 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.9■□□□□ 0.94
Hoxa9P09631 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxa9P09631 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Hoxa9P09631 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.9■□□□□ 0.94
Hoxa9P09631 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hoxa9P09631 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.9■□□□□ 0.94
Hoxa9P09631 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Hoxa9P09631 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Hoxa9P09631 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.89■□□□□ 0.94
Hoxa9P09631 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.89■□□□□ 0.93
Hoxa9P09631 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxa9P09631 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hoxa9P09631 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxa9P09631 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.88■□□□□ 0.93
Hoxa9P09631 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxa9P09631 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hoxa9P09631 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Hoxa9P09631 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxa9P09631 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
Hoxa9P09631 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxa9P09631 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxa9P09631 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Hoxa9P09631 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxa9P09631 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Hoxa9P09631 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hoxa9P09631 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Hoxa9P09631 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxa9P09631 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxa9P09631 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Hoxa9P09631 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hoxa9P09631 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 151.2 ms