Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
P06336 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P06336 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P06336 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.19■□□□□ 0.66
P06336 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
P06336 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
P06336 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
P06336 Rps24-207ENSMUST00000224568 714 ntBASIC19.19■□□□□ 0.66
P06336 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P06336 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.19■□□□□ 0.66
P06336 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P06336 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
P06336 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
P06336 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
P06336 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
P06336 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P06336 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.18■□□□□ 0.66
P06336 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P06336 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P06336 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P06336 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
P06336 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P06336 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
P06336 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P06336 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
P06336 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
P06336 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.17■□□□□ 0.66
P06336 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P06336 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P06336 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P06336 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P06336 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
P06336 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.16■□□□□ 0.66
P06336 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
P06336 Gm7417-201ENSMUST00000192950 473 ntBASIC19.16■□□□□ 0.66
P06336 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P06336 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.16■□□□□ 0.66
P06336 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P06336 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.16■□□□□ 0.66
P06336 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
P06336 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P06336 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
P06336 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
P06336 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
P06336 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
P06336 Gm45102-201ENSMUST00000207427 857 ntBASIC19.15■□□□□ 0.66
P06336 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
P06336 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
P06336 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P06336 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.14■□□□□ 0.66
P06336 Gm14117-201ENSMUST00000122417 843 ntBASIC19.14■□□□□ 0.65
P06336 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.14■□□□□ 0.65
P06336 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.14■□□□□ 0.65
P06336 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P06336 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P06336 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
P06336 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
P06336 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
P06336 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.13■□□□□ 0.65
P06336 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
P06336 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P06336 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P06336 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P06336 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
P06336 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P06336 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P06336 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P06336 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.13■□□□□ 0.65
P06336 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.12■□□□□ 0.65
P06336 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
P06336 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
P06336 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.12■□□□□ 0.65
P06336 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P06336 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P06336 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.11■□□□□ 0.65
P06336 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P06336 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.11■□□□□ 0.65
P06336 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P06336 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.11■□□□□ 0.65
P06336 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P06336 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P06336 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P06336 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P06336 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P06336 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
P06336 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.1■□□□□ 0.65
P06336 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P06336 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
P06336 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P06336 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
P06336 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P06336 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
P06336 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P06336 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
P06336 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
P06336 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P06336 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
P06336 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.09■□□□□ 0.65
P06336 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
P06336 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms