Protein–RNA interactions for Protein: P06321

T-cell receptor beta chain V region A20.2.25, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06321 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P06321 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P06321 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P06321 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
P06321 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
P06321 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.7■□□□□ 0.58
P06321 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.7■□□□□ 0.58
P06321 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P06321 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.7■□□□□ 0.58
P06321 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
P06321 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P06321 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P06321 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
P06321 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P06321 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P06321 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P06321 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P06321 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P06321 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.69■□□□□ 0.58
P06321 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P06321 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P06321 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P06321 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P06321 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P06321 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.68■□□□□ 0.58
P06321 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
P06321 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
P06321 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P06321 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.68■□□□□ 0.58
P06321 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.68■□□□□ 0.58
P06321 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
P06321 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P06321 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.67■□□□□ 0.58
P06321 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
P06321 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P06321 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P06321 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
P06321 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
P06321 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P06321 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.66■□□□□ 0.58
P06321 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P06321 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P06321 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P06321 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06321 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06321 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
P06321 Gm10399-202ENSMUST00000202768 748 ntBASIC18.65■□□□□ 0.58
P06321 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06321 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P06321 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06321 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
P06321 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06321 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06321 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06321 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06321 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06321 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06321 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06321 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
P06321 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.64■□□□□ 0.58
P06321 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
P06321 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.64■□□□□ 0.57
P06321 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.64■□□□□ 0.57
P06321 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.64■□□□□ 0.57
P06321 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P06321 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P06321 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P06321 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P06321 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
P06321 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06321 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06321 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.63■□□□□ 0.57
P06321 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
P06321 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.63■□□□□ 0.57
P06321 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.63■□□□□ 0.57
P06321 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06321 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
P06321 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.63■□□□□ 0.57
P06321 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06321 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.63■□□□□ 0.57
P06321 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06321 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06321 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06321 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06321 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06321 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06321 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.62■□□□□ 0.57
P06321 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P06321 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P06321 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
P06321 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P06321 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
P06321 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
P06321 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
P06321 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P06321 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.61■□□□□ 0.57
P06321 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
P06321 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
P06321 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.61■□□□□ 0.57
P06321 Gm5812-201ENSMUST00000061073 957 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms