Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm10139O88245 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm10139O88245 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm10139O88245 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm10139O88245 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Gm10139O88245 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Gm10139O88245 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Gm10139O88245 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm10139O88245 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm10139O88245 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm10139O88245 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm10139O88245 Gm11847-201ENSMUST00000125165 1119 ntBASIC12.68□□□□□ -0.38
Gm10139O88245 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm10139O88245 Mir6538-201ENSMUST00000183713 110 ntBASIC12.68□□□□□ -0.38
Gm10139O88245 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Gm10139O88245 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Gm10139O88245 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm10139O88245 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm10139O88245 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Gm10139O88245 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10139O88245 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10139O88245 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10139O88245 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10139O88245 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10139O88245 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10139O88245 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10139O88245 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Gm10139O88245 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10139O88245 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Gm10139O88245 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10139O88245 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10139O88245 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm10139O88245 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Gm10139O88245 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Gm10139O88245 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10139O88245 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Gm10139O88245 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10139O88245 Snhg20-203ENSMUST00000182811 2153 ntBASIC12.66□□□□□ -0.38
Gm10139O88245 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Gm10139O88245 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10139O88245 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10139O88245 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Gm10139O88245 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10139O88245 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC12.66□□□□□ -0.38
Gm10139O88245 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10139O88245 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10139O88245 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10139O88245 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10139O88245 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10139O88245 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10139O88245 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Gm10139O88245 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC12.66□□□□□ -0.38
Gm10139O88245 Gm28536-201ENSMUST00000190971 1317 ntBASIC12.65□□□□□ -0.38
Gm10139O88245 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10139O88245 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10139O88245 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10139O88245 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10139O88245 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10139O88245 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Gm10139O88245 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10139O88245 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Gm10139O88245 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10139O88245 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC12.65□□□□□ -0.38
Gm10139O88245 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC12.65□□□□□ -0.38
Gm10139O88245 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10139O88245 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10139O88245 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10139O88245 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10139O88245 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10139O88245 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm10139O88245 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Gm10139O88245 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Gm10139O88245 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Gm10139O88245 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Gm10139O88245 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
Gm10139O88245 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Gm10139O88245 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10139O88245 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10139O88245 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10139O88245 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10139O88245 Gm8093-201ENSMUST00000128935 1892 ntBASIC12.64□□□□□ -0.39
Gm10139O88245 Notumos-201ENSMUST00000151998 2659 ntBASIC12.64□□□□□ -0.39
Gm10139O88245 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Gm10139O88245 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10139O88245 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC12.64□□□□□ -0.39
Gm10139O88245 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10139O88245 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC12.64□□□□□ -0.39
Gm10139O88245 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC12.64□□□□□ -0.39
Gm10139O88245 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10139O88245 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10139O88245 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10139O88245 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10139O88245 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10139O88245 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10139O88245 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10139O88245 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Gm10139O88245 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm10139O88245 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10139O88245 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm10139O88245 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms