Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Gm7432-201ENSMUST00000210343 879 ntBASIC18.58■□□□□ 0.56
Lsm2O35900 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm2O35900 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm2O35900 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm2O35900 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm2O35900 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Lsm2O35900 Gm11599-201ENSMUST00000118720 878 ntBASIC18.57■□□□□ 0.56
Lsm2O35900 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.57■□□□□ 0.56
Lsm2O35900 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm2O35900 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.57■□□□□ 0.56
Lsm2O35900 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm2O35900 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm2O35900 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Lsm2O35900 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm2O35900 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm2O35900 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Lsm2O35900 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm2O35900 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm2O35900 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Lsm2O35900 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm2O35900 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm2O35900 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm2O35900 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm2O35900 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Lsm2O35900 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm2O35900 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm2O35900 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm2O35900 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm2O35900 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.54■□□□□ 0.56
Lsm2O35900 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm2O35900 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm2O35900 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Lsm2O35900 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm2O35900 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm2O35900 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm2O35900 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm2O35900 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm2O35900 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm2O35900 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm2O35900 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm2O35900 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm2O35900 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Lsm2O35900 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm2O35900 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm2O35900 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm2O35900 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm2O35900 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.52■□□□□ 0.56
Lsm2O35900 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.52■□□□□ 0.56
Lsm2O35900 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm2O35900 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm2O35900 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Lsm2O35900 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm2O35900 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm2O35900 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Lsm2O35900 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Lsm2O35900 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm2O35900 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm2O35900 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Lsm2O35900 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm2O35900 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.51■□□□□ 0.55
Lsm2O35900 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Lsm2O35900 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Lsm2O35900 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm2O35900 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm2O35900 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm2O35900 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm2O35900 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm2O35900 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm2O35900 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.5■□□□□ 0.55
Lsm2O35900 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.5■□□□□ 0.55
Lsm2O35900 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm2O35900 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm2O35900 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm2O35900 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm2O35900 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm2O35900 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.49■□□□□ 0.55
Lsm2O35900 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm2O35900 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm2O35900 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.49■□□□□ 0.55
Lsm2O35900 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm2O35900 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Lsm2O35900 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm2O35900 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm2O35900 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm2O35900 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm2O35900 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Lsm2O35900 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.48■□□□□ 0.55
Lsm2O35900 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.48■□□□□ 0.55
Lsm2O35900 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.48■□□□□ 0.55
Lsm2O35900 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm2O35900 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm2O35900 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm2O35900 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Lsm2O35900 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm2O35900 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.47■□□□□ 0.55
Lsm2O35900 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm2O35900 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.47■□□□□ 0.55
Lsm2O35900 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Lsm2O35900 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm2O35900 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms