Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Nr1i3O35627 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.4■■□□□ 1.18
Nr1i3O35627 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Nr1i3O35627 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Nr1i3O35627 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nr1i3O35627 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Nr1i3O35627 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Nr1i3O35627 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Nr1i3O35627 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Nr1i3O35627 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.38■■□□□ 1.17
Nr1i3O35627 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nr1i3O35627 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Nr1i3O35627 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nr1i3O35627 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nr1i3O35627 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nr1i3O35627 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Nr1i3O35627 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Nr1i3O35627 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nr1i3O35627 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nr1i3O35627 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nr1i3O35627 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Nr1i3O35627 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Nr1i3O35627 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nr1i3O35627 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nr1i3O35627 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Nr1i3O35627 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nr1i3O35627 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Nr1i3O35627 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Nr1i3O35627 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Nr1i3O35627 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Nr1i3O35627 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Nr1i3O35627 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Nr1i3O35627 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Nr1i3O35627 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Nr1i3O35627 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.36■■□□□ 1.17
Nr1i3O35627 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.36■■□□□ 1.17
Nr1i3O35627 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Nr1i3O35627 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Nr1i3O35627 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Nr1i3O35627 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Nr1i3O35627 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nr1i3O35627 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nr1i3O35627 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
Nr1i3O35627 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nr1i3O35627 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nr1i3O35627 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nr1i3O35627 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nr1i3O35627 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.35■■□□□ 1.17
Nr1i3O35627 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Nr1i3O35627 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nr1i3O35627 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Nr1i3O35627 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Nr1i3O35627 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nr1i3O35627 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nr1i3O35627 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nr1i3O35627 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nr1i3O35627 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nr1i3O35627 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nr1i3O35627 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Nr1i3O35627 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nr1i3O35627 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Nr1i3O35627 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Nr1i3O35627 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Nr1i3O35627 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.33■■□□□ 1.17
Nr1i3O35627 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.33■■□□□ 1.17
Nr1i3O35627 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.33■■□□□ 1.17
Nr1i3O35627 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Nr1i3O35627 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Nr1i3O35627 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nr1i3O35627 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nr1i3O35627 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Nr1i3O35627 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.32■■□□□ 1.16
Nr1i3O35627 Gm45444-201ENSMUST00000211394 898 ntBASIC22.32■■□□□ 1.16
Nr1i3O35627 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nr1i3O35627 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nr1i3O35627 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.32■■□□□ 1.16
Nr1i3O35627 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.31■■□□□ 1.16
Nr1i3O35627 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nr1i3O35627 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nr1i3O35627 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Nr1i3O35627 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nr1i3O35627 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nr1i3O35627 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nr1i3O35627 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.31■■□□□ 1.16
Nr1i3O35627 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Nr1i3O35627 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nr1i3O35627 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Nr1i3O35627 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nr1i3O35627 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.3■■□□□ 1.16
Nr1i3O35627 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Nr1i3O35627 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.3■■□□□ 1.16
Nr1i3O35627 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Nr1i3O35627 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nr1i3O35627 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.3■■□□□ 1.16
Nr1i3O35627 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nr1i3O35627 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nr1i3O35627 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Nr1i3O35627 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.29■■□□□ 1.16
Nr1i3O35627 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Nr1i3O35627 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms