Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.34■■□□□ 1.01
Ptch2O35595 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.34■■□□□ 1.01
Ptch2O35595 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ptch2O35595 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptch2O35595 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Ptch2O35595 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ptch2O35595 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptch2O35595 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ptch2O35595 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.33■■□□□ 1.01
Ptch2O35595 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptch2O35595 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ptch2O35595 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptch2O35595 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.32■■□□□ 1
Ptch2O35595 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptch2O35595 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.32■■□□□ 1
Ptch2O35595 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ptch2O35595 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptch2O35595 Gm9870-201ENSMUST00000063874 645 ntBASIC21.32■■□□□ 1
Ptch2O35595 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ptch2O35595 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Ptch2O35595 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Ptch2O35595 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ptch2O35595 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptch2O35595 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ptch2O35595 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptch2O35595 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ptch2O35595 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ptch2O35595 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptch2O35595 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptch2O35595 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ptch2O35595 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptch2O35595 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.3■■□□□ 1
Ptch2O35595 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptch2O35595 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptch2O35595 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ptch2O35595 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ptch2O35595 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Ptch2O35595 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.29■■□□□ 1
Ptch2O35595 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.29■■□□□ 1
Ptch2O35595 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
Ptch2O35595 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ptch2O35595 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptch2O35595 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ptch2O35595 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ptch2O35595 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.28■■□□□ 1
Ptch2O35595 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ptch2O35595 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ptch2O35595 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ptch2O35595 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.27■■□□□ 1
Ptch2O35595 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.27■■□□□ 1
Ptch2O35595 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ptch2O35595 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ptch2O35595 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Ptch2O35595 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ptch2O35595 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptch2O35595 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptch2O35595 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.26■□□□□ 0.99
Ptch2O35595 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Ptch2O35595 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptch2O35595 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.26■□□□□ 0.99
Ptch2O35595 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptch2O35595 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptch2O35595 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptch2O35595 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ptch2O35595 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
Ptch2O35595 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.25■□□□□ 0.99
Ptch2O35595 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.25■□□□□ 0.99
Ptch2O35595 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Ptch2O35595 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptch2O35595 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ptch2O35595 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ptch2O35595 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptch2O35595 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptch2O35595 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptch2O35595 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptch2O35595 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptch2O35595 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.24■□□□□ 0.99
Ptch2O35595 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ptch2O35595 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptch2O35595 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ptch2O35595 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
Ptch2O35595 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptch2O35595 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ptch2O35595 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ptch2O35595 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Ptch2O35595 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Ptch2O35595 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ptch2O35595 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptch2O35595 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ptch2O35595 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptch2O35595 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ptch2O35595 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ptch2O35595 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ptch2O35595 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ptch2O35595 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Ptch2O35595 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.22■□□□□ 0.99
Ptch2O35595 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ptch2O35595 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Ptch2O35595 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.21■□□□□ 0.99
Ptch2O35595 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms