Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Raet1aO08602 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1aO08602 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1aO08602 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.43■□□□□ 0.54
Raet1aO08602 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Raet1aO08602 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Raet1aO08602 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1aO08602 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1aO08602 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.42■□□□□ 0.54
Raet1aO08602 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1aO08602 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1aO08602 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1aO08602 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1aO08602 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1aO08602 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Raet1aO08602 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.41■□□□□ 0.54
Raet1aO08602 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.41■□□□□ 0.54
Raet1aO08602 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Raet1aO08602 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.41■□□□□ 0.54
Raet1aO08602 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.41■□□□□ 0.54
Raet1aO08602 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Raet1aO08602 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Raet1aO08602 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Raet1aO08602 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Raet1aO08602 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1aO08602 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1aO08602 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1aO08602 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1aO08602 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Raet1aO08602 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Raet1aO08602 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Raet1aO08602 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Raet1aO08602 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Raet1aO08602 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Raet1aO08602 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Raet1aO08602 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Raet1aO08602 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Raet1aO08602 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
Raet1aO08602 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Raet1aO08602 Gm10232-201ENSMUST00000089221 720 ntBASIC18.39■□□□□ 0.53
Raet1aO08602 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Raet1aO08602 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Raet1aO08602 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Raet1aO08602 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Raet1aO08602 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Raet1aO08602 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Raet1aO08602 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Raet1aO08602 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Raet1aO08602 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Raet1aO08602 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Raet1aO08602 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.38■□□□□ 0.53
Raet1aO08602 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Raet1aO08602 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.38■□□□□ 0.53
Raet1aO08602 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Raet1aO08602 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Raet1aO08602 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1aO08602 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.37■□□□□ 0.53
Raet1aO08602 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.37■□□□□ 0.53
Raet1aO08602 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.37■□□□□ 0.53
Raet1aO08602 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1aO08602 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1aO08602 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.37■□□□□ 0.53
Raet1aO08602 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.37■□□□□ 0.53
Raet1aO08602 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1aO08602 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1aO08602 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1aO08602 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Raet1aO08602 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1aO08602 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.36■□□□□ 0.53
Raet1aO08602 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Raet1aO08602 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1aO08602 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Raet1aO08602 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1aO08602 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1aO08602 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1aO08602 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1aO08602 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1aO08602 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.36■□□□□ 0.53
Raet1aO08602 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Raet1aO08602 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Raet1aO08602 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raet1aO08602 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raet1aO08602 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raet1aO08602 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Raet1aO08602 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Raet1aO08602 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raet1aO08602 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raet1aO08602 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Raet1aO08602 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raet1aO08602 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raet1aO08602 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raet1aO08602 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raet1aO08602 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Raet1aO08602 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.34■□□□□ 0.53
Raet1aO08602 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Raet1aO08602 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.33■□□□□ 0.53
Raet1aO08602 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Raet1aO08602 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Raet1aO08602 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Raet1aO08602 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms