Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trav13n-4A0A0G2JG01 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13n-4A0A0G2JG01 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13n-4A0A0G2JG01 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13n-4A0A0G2JG01 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13n-4A0A0G2JG01 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav13n-4A0A0G2JG01 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13n-4A0A0G2JG01 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav13n-4A0A0G2JG01 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13n-4A0A0G2JG01 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13n-4A0A0G2JG01 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav13n-4A0A0G2JG01 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13n-4A0A0G2JG01 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Trav13n-4A0A0G2JG01 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13n-4A0A0G2JG01 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13n-4A0A0G2JG01 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13n-4A0A0G2JG01 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav13n-4A0A0G2JG01 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13n-4A0A0G2JG01 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav13n-4A0A0G2JG01 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trav13n-4A0A0G2JG01 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav13n-4A0A0G2JG01 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.69■□□□□ 0.26
Trav13n-4A0A0G2JG01 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13n-4A0A0G2JG01 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.69■□□□□ 0.26
Trav13n-4A0A0G2JG01 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.69■□□□□ 0.26
Trav13n-4A0A0G2JG01 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13n-4A0A0G2JG01 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13n-4A0A0G2JG01 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13n-4A0A0G2JG01 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13n-4A0A0G2JG01 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.69■□□□□ 0.26
Trav13n-4A0A0G2JG01 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13n-4A0A0G2JG01 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav13n-4A0A0G2JG01 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-4A0A0G2JG01 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-4A0A0G2JG01 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-4A0A0G2JG01 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-4A0A0G2JG01 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-4A0A0G2JG01 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-4A0A0G2JG01 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.68■□□□□ 0.26
Trav13n-4A0A0G2JG01 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-4A0A0G2JG01 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trav13n-4A0A0G2JG01 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-4A0A0G2JG01 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-4A0A0G2JG01 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav13n-4A0A0G2JG01 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13n-4A0A0G2JG01 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trav13n-4A0A0G2JG01 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13n-4A0A0G2JG01 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13n-4A0A0G2JG01 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.67■□□□□ 0.26
Trav13n-4A0A0G2JG01 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav13n-4A0A0G2JG01 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav13n-4A0A0G2JG01 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav13n-4A0A0G2JG01 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13n-4A0A0G2JG01 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13n-4A0A0G2JG01 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13n-4A0A0G2JG01 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav13n-4A0A0G2JG01 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
Trav13n-4A0A0G2JG01 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Trav13n-4A0A0G2JG01 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav13n-4A0A0G2JG01 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13n-4A0A0G2JG01 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav13n-4A0A0G2JG01 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13n-4A0A0G2JG01 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13n-4A0A0G2JG01 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav13n-4A0A0G2JG01 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms