Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.98□□□□□ -0.01
Trav13n-1A0A0G2JEU8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Gm40881-201ENSMUST00000223397 166 ntBASIC14.98□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC14.97□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Gm10399-202ENSMUST00000202768 748 ntBASIC14.96□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav13n-1A0A0G2JEU8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.96□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-1A0A0G2JEU8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav13n-1A0A0G2JEU8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.95□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13n-1A0A0G2JEU8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.94□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.93□□□□□ -0.02
Trav13n-1A0A0G2JEU8 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.93□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav13n-1A0A0G2JEU8 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.92□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav13n-1A0A0G2JEU8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
Trav13n-1A0A0G2JEU8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.91□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.91□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13n-1A0A0G2JEU8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-1A0A0G2JEU8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-1A0A0G2JEU8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13n-1A0A0G2JEU8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 222 ms