Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv3A0A0A6YYE2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv3A0A0A6YYE2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv3A0A0A6YYE2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Trbv3A0A0A6YYE2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv3A0A0A6YYE2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv3A0A0A6YYE2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trbv3A0A0A6YYE2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv3A0A0A6YYE2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv3A0A0A6YYE2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv3A0A0A6YYE2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Trbv3A0A0A6YYE2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trbv3A0A0A6YYE2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv3A0A0A6YYE2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.02■□□□□ 0.15
Trbv3A0A0A6YYE2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Trbv3A0A0A6YYE2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv3A0A0A6YYE2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv3A0A0A6YYE2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv3A0A0A6YYE2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv3A0A0A6YYE2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv3A0A0A6YYE2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv3A0A0A6YYE2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv3A0A0A6YYE2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv3A0A0A6YYE2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv3A0A0A6YYE2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv3A0A0A6YYE2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv3A0A0A6YYE2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.01■□□□□ 0.15
Trbv3A0A0A6YYE2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trbv3A0A0A6YYE2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv3A0A0A6YYE2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbv3A0A0A6YYE2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv3A0A0A6YYE2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trbv3A0A0A6YYE2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv3A0A0A6YYE2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv3A0A0A6YYE2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv3A0A0A6YYE2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv3A0A0A6YYE2 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv3A0A0A6YYE2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv3A0A0A6YYE2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv3A0A0A6YYE2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv3A0A0A6YYE2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Trbv3A0A0A6YYE2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Trbv3A0A0A6YYE2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv3A0A0A6YYE2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC15.99■□□□□ 0.15
Trbv3A0A0A6YYE2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv3A0A0A6YYE2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv3A0A0A6YYE2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Trbv3A0A0A6YYE2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv3A0A0A6YYE2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trbv3A0A0A6YYE2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv3A0A0A6YYE2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv3A0A0A6YYE2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv3A0A0A6YYE2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv3A0A0A6YYE2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.98■□□□□ 0.15
Trbv3A0A0A6YYE2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv3A0A0A6YYE2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC15.98■□□□□ 0.15
Trbv3A0A0A6YYE2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.98■□□□□ 0.15
Trbv3A0A0A6YYE2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trbv3A0A0A6YYE2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trbv3A0A0A6YYE2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv3A0A0A6YYE2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.98■□□□□ 0.15
Trbv3A0A0A6YYE2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv3A0A0A6YYE2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv3A0A0A6YYE2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.98■□□□□ 0.15
Trbv3A0A0A6YYE2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv3A0A0A6YYE2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv3A0A0A6YYE2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trbv3A0A0A6YYE2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv3A0A0A6YYE2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trbv3A0A0A6YYE2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv3A0A0A6YYE2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv3A0A0A6YYE2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv3A0A0A6YYE2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv3A0A0A6YYE2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv3A0A0A6YYE2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.96■□□□□ 0.15
Trbv3A0A0A6YYE2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv3A0A0A6YYE2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv3A0A0A6YYE2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC15.96■□□□□ 0.15
Trbv3A0A0A6YYE2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trbv3A0A0A6YYE2 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.96■□□□□ 0.15
Trbv3A0A0A6YYE2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.96■□□□□ 0.15
Trbv3A0A0A6YYE2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv3A0A0A6YYE2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
Trbv3A0A0A6YYE2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv3A0A0A6YYE2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms