Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Trav6d-7A0A075B6B0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Trav6d-7A0A075B6B0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav6d-7A0A075B6B0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Trav6d-7A0A075B6B0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-7A0A075B6B0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-7A0A075B6B0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-7A0A075B6B0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Trav6d-7A0A075B6B0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-7A0A075B6B0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-7A0A075B6B0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav6d-7A0A075B6B0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.95■□□□□ 0.14
Trav6d-7A0A075B6B0 Gm43566-201ENSMUST00000196851 808 ntBASIC15.95■□□□□ 0.14
Trav6d-7A0A075B6B0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-7A0A075B6B0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-7A0A075B6B0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-7A0A075B6B0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6d-7A0A075B6B0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav6d-7A0A075B6B0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav6d-7A0A075B6B0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-7A0A075B6B0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-7A0A075B6B0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-7A0A075B6B0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Trav6d-7A0A075B6B0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-7A0A075B6B0 Gm15820-201ENSMUST00000201566 728 ntBASIC15.94■□□□□ 0.14
Trav6d-7A0A075B6B0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav6d-7A0A075B6B0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-7A0A075B6B0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-7A0A075B6B0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6d-7A0A075B6B0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav6d-7A0A075B6B0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-7A0A075B6B0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav6d-7A0A075B6B0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav6d-7A0A075B6B0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-7A0A075B6B0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-7A0A075B6B0 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.93■□□□□ 0.14
Trav6d-7A0A075B6B0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.93■□□□□ 0.14
Trav6d-7A0A075B6B0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-7A0A075B6B0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-7A0A075B6B0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-7A0A075B6B0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-7A0A075B6B0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6d-7A0A075B6B0 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.92■□□□□ 0.14
Trav6d-7A0A075B6B0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-7A0A075B6B0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-7A0A075B6B0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-7A0A075B6B0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Trav6d-7A0A075B6B0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav6d-7A0A075B6B0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-7A0A075B6B0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-7A0A075B6B0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.92■□□□□ 0.14
Trav6d-7A0A075B6B0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-7A0A075B6B0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-7A0A075B6B0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6d-7A0A075B6B0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.91■□□□□ 0.14
Trav6d-7A0A075B6B0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav6d-7A0A075B6B0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trav6d-7A0A075B6B0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-7A0A075B6B0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6d-7A0A075B6B0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav6d-7A0A075B6B0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-7A0A075B6B0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.9■□□□□ 0.14
Trav6d-7A0A075B6B0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC15.9■□□□□ 0.14
Trav6d-7A0A075B6B0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-7A0A075B6B0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav6d-7A0A075B6B0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-7A0A075B6B0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-7A0A075B6B0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-7A0A075B6B0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-7A0A075B6B0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-7A0A075B6B0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-7A0A075B6B0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6d-7A0A075B6B0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-7A0A075B6B0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-7A0A075B6B0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-7A0A075B6B0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-7A0A075B6B0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-7A0A075B6B0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-7A0A075B6B0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-7A0A075B6B0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-7A0A075B6B0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-7A0A075B6B0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6d-7A0A075B6B0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav6d-7A0A075B6B0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-7A0A075B6B0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-7A0A075B6B0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav6d-7A0A075B6B0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav6d-7A0A075B6B0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav6d-7A0A075B6B0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav6d-7A0A075B6B0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav6d-7A0A075B6B0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-7A0A075B6B0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-7A0A075B6B0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav6d-7A0A075B6B0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-7A0A075B6B0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-7A0A075B6B0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-7A0A075B6B0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6d-7A0A075B6B0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav6d-7A0A075B6B0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav6d-7A0A075B6B0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms