Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav13-1A0A075B644 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13-1A0A075B644 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13-1A0A075B644 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13-1A0A075B644 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13-1A0A075B644 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav13-1A0A075B644 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-1A0A075B644 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-1A0A075B644 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-1A0A075B644 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-1A0A075B644 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav13-1A0A075B644 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-1A0A075B644 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-1A0A075B644 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-1A0A075B644 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav13-1A0A075B644 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav13-1A0A075B644 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav13-1A0A075B644 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Trav13-1A0A075B644 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13-1A0A075B644 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav13-1A0A075B644 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.69□□□□□ -0.06
Trav13-1A0A075B644 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13-1A0A075B644 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13-1A0A075B644 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trav13-1A0A075B644 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13-1A0A075B644 Gm26766-202ENSMUST00000227544 2347 ntBASIC14.69□□□□□ -0.06
Trav13-1A0A075B644 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav13-1A0A075B644 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-1A0A075B644 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-1A0A075B644 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-1A0A075B644 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav13-1A0A075B644 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav13-1A0A075B644 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
Trav13-1A0A075B644 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav13-1A0A075B644 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-1A0A075B644 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.68□□□□□ -0.06
Trav13-1A0A075B644 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-1A0A075B644 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-1A0A075B644 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-1A0A075B644 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav13-1A0A075B644 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-1A0A075B644 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Trav13-1A0A075B644 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-1A0A075B644 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-1A0A075B644 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-1A0A075B644 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-1A0A075B644 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav13-1A0A075B644 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-1A0A075B644 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13-1A0A075B644 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-1A0A075B644 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav13-1A0A075B644 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav13-1A0A075B644 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-1A0A075B644 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav13-1A0A075B644 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-1A0A075B644 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-1A0A075B644 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-1A0A075B644 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav13-1A0A075B644 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13-1A0A075B644 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13-1A0A075B644 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13-1A0A075B644 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav13-1A0A075B644 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav13-1A0A075B644 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav13-1A0A075B644 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13-1A0A075B644 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Trav13-1A0A075B644 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav13-1A0A075B644 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13-1A0A075B644 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav13-1A0A075B644 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13-1A0A075B644 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav13-1A0A075B644 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13-1A0A075B644 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13-1A0A075B644 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav13-1A0A075B644 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-1A0A075B644 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-1A0A075B644 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.64□□□□□ -0.07
Trav13-1A0A075B644 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-1A0A075B644 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav13-1A0A075B644 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-1A0A075B644 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-1A0A075B644 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav13-1A0A075B644 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.64□□□□□ -0.07
Trav13-1A0A075B644 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-1A0A075B644 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13-1A0A075B644 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-1A0A075B644 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-1A0A075B644 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-1A0A075B644 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-1A0A075B644 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-1A0A075B644 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-1A0A075B644 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav13-1A0A075B644 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav13-1A0A075B644 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav13-1A0A075B644 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-1A0A075B644 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-1A0A075B644 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-1A0A075B644 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-1A0A075B644 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13-1A0A075B644 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms