Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Gm16166-201ENSMUST00000118291 787 ntBASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Mir6979-201ENSMUST00000183927 56 ntBASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Gm4482-201ENSMUST00000200876 742 ntBASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Gm4157-201ENSMUST00000211647 679 ntBASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Gm2553-201ENSMUST00000215986 605 ntBASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Scn8aQ9WTU3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn8aQ9WTU3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 Gm15207-201ENSMUST00000119259 442 ntBASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 Spcs1-203ENSMUST00000226374 592 ntBASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 Gm26448-201ENSMUST00000082446 203 ntBASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Scn8aQ9WTU3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms