Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gm27155-201ENSMUST00000183716 898 ntBASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gm37154-201ENSMUST00000192266 1290 ntBASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gm43905-201ENSMUST00000204516 204 ntBASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gm18598-201ENSMUST00000207724 597 ntBASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 AC154646.1-201ENSMUST00000225011 1092 ntBASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Morn2-202ENSMUST00000227729 656 ntBASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Itm2b-204ENSMUST00000228637 783 ntBASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lhx6Q9R1R0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Gm14807-201ENSMUST00000116640 983 ntBASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Gm14021-201ENSMUST00000117683 961 ntBASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Gm14103-201ENSMUST00000119075 366 ntBASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Gm13754-201ENSMUST00000120486 998 ntBASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Mir3473a-201ENSMUST00000175011 78 ntBASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Gm37922-201ENSMUST00000195596 455 ntBASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Gm37497-201ENSMUST00000195830 798 ntBASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Gm42720-201ENSMUST00000196813 300 ntBASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Gm45770-201ENSMUST00000212105 616 ntBASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Lhx6Q9R1R0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms