Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Gm6114-201ENSMUST00000182472 968 ntBASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Gm8384-201ENSMUST00000190905 704 ntBASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Gm9369-201ENSMUST00000196009 733 ntBASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Gm5982-201ENSMUST00000196234 512 ntBASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Gm24078-201ENSMUST00000158184 103 ntBASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Mir8093-201ENSMUST00000185043 137 ntBASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Gm44323-201ENSMUST00000198689 129 ntBASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Gm9791-201ENSMUST00000060997 447 ntBASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.94□□□□□ -0.5
Col4a4Q9QZR9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Gm4294-201ENSMUST00000105169 614 ntBASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Gm18010-201ENSMUST00000203553 202 ntBASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Map1b-203ENSMUST00000223725 2669 ntBASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Col4a4Q9QZR9 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Gm11475-201ENSMUST00000118482 476 ntBASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.92□□□□□ -0.5
Col4a4Q9QZR9 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms