Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trem1Q9JKE2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Gm19931-201ENSMUST00000198920 368 ntBASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Gm18905-201ENSMUST00000205454 928 ntBASIC10.94□□□□□ -0.66
Trem1Q9JKE2 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.94□□□□□ -0.66
Trem1Q9JKE2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trem1Q9JKE2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Gm8036-201ENSMUST00000118089 1718 ntBASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Mir449b-201ENSMUST00000104833 80 ntBASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Gm15693-201ENSMUST00000120470 637 ntBASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Gm37277-201ENSMUST00000194052 1111 ntBASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC10.93□□□□□ -0.66
Trem1Q9JKE2 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms