Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12□□□□□ -0.49
Rrp8Q9DB85 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12□□□□□ -0.49
Rrp8Q9DB85 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12□□□□□ -0.49
Rrp8Q9DB85 Gm8343-201ENSMUST00000182705 994 ntBASIC12□□□□□ -0.49
Rrp8Q9DB85 Mir6546-201ENSMUST00000184460 62 ntBASIC12□□□□□ -0.49
Rrp8Q9DB85 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12□□□□□ -0.49
Rrp8Q9DB85 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12□□□□□ -0.49
Rrp8Q9DB85 Gm43058-201ENSMUST00000197645 625 ntBASIC12□□□□□ -0.49
Rrp8Q9DB85 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Rrp8Q9DB85 Gm8285-201ENSMUST00000208293 759 ntBASIC12□□□□□ -0.49
Rrp8Q9DB85 Gm45550-201ENSMUST00000209380 946 ntBASIC12□□□□□ -0.49
Rrp8Q9DB85 Gm45909-201ENSMUST00000212413 1031 ntBASIC12□□□□□ -0.49
Rrp8Q9DB85 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12□□□□□ -0.49
Rrp8Q9DB85 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rrp8Q9DB85 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rrp8Q9DB85 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Rrp8Q9DB85 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rrp8Q9DB85 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rrp8Q9DB85 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rrp8Q9DB85 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Gm7722-201ENSMUST00000120646 741 ntBASIC11.99□□□□□ -0.49
Rrp8Q9DB85 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Gm28686-201ENSMUST00000187404 609 ntBASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rrp8Q9DB85 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.98□□□□□ -0.49
Rrp8Q9DB85 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms