Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
U2af1Q9D883 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
U2af1Q9D883 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
U2af1Q9D883 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Gm5616-201ENSMUST00000165252 384 ntBASIC16.07■□□□□ 0.16
U2af1Q9D883 Gm8741-201ENSMUST00000174736 384 ntBASIC16.07■□□□□ 0.16
U2af1Q9D883 Gm27627-201ENSMUST00000183644 150 ntBASIC16.07■□□□□ 0.16
U2af1Q9D883 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
U2af1Q9D883 AC153954.1-201ENSMUST00000216959 255 ntBASIC16.07■□□□□ 0.16
U2af1Q9D883 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
U2af1Q9D883 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
U2af1Q9D883 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
U2af1Q9D883 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
U2af1Q9D883 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC16.06■□□□□ 0.16
U2af1Q9D883 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
U2af1Q9D883 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
U2af1Q9D883 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
U2af1Q9D883 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC16.06■□□□□ 0.16
U2af1Q9D883 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
U2af1Q9D883 CU062626.3-201ENSMUST00000225522 1411 ntBASIC16.06■□□□□ 0.16
U2af1Q9D883 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC16.06■□□□□ 0.16
U2af1Q9D883 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
U2af1Q9D883 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
U2af1Q9D883 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
U2af1Q9D883 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
U2af1Q9D883 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
U2af1Q9D883 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.06■□□□□ 0.16
U2af1Q9D883 AY036118-201ENSMUST00000200021 923 ntBASIC16.06■□□□□ 0.16
U2af1Q9D883 Gm43962-201ENSMUST00000203898 190 ntBASIC16.06■□□□□ 0.16
U2af1Q9D883 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC16.06■□□□□ 0.16
U2af1Q9D883 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC16.06■□□□□ 0.16
U2af1Q9D883 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
U2af1Q9D883 Gm5455-201ENSMUST00000058710 715 ntBASIC16.06■□□□□ 0.16
U2af1Q9D883 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
U2af1Q9D883 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
U2af1Q9D883 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
U2af1Q9D883 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
U2af1Q9D883 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
U2af1Q9D883 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
U2af1Q9D883 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
U2af1Q9D883 AC125108.1-201ENSMUST00000218986 2330 ntBASIC16.06■□□□□ 0.16
U2af1Q9D883 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
U2af1Q9D883 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
U2af1Q9D883 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
U2af1Q9D883 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
U2af1Q9D883 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
U2af1Q9D883 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC16.05■□□□□ 0.16
U2af1Q9D883 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
U2af1Q9D883 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
U2af1Q9D883 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 Gm12164-201ENSMUST00000121695 551 ntBASIC16.05■□□□□ 0.16
U2af1Q9D883 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC16.05■□□□□ 0.16
U2af1Q9D883 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC16.05■□□□□ 0.16
U2af1Q9D883 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC16.05■□□□□ 0.16
U2af1Q9D883 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
U2af1Q9D883 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC16.05■□□□□ 0.16
U2af1Q9D883 Gm21027-201ENSMUST00000219300 1236 ntBASIC16.05■□□□□ 0.16
U2af1Q9D883 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC16.05■□□□□ 0.16
U2af1Q9D883 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
U2af1Q9D883 Gm7224-201ENSMUST00000121359 2066 ntBASIC16.05■□□□□ 0.16
U2af1Q9D883 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC16.05■□□□□ 0.16
U2af1Q9D883 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC16.05■□□□□ 0.16
U2af1Q9D883 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
U2af1Q9D883 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms