Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Gm27486-201ENSMUST00000184923 80 ntBASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Chmp5Q9D7S9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 Gm37513-201ENSMUST00000194830 2268 ntBASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 Gm38378-201ENSMUST00000195153 2268 ntBASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chmp5Q9D7S9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Gm12314-201ENSMUST00000118104 538 ntBASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Gm26927-201ENSMUST00000182385 965 ntBASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp5Q9D7S9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 Gm22058-201ENSMUST00000083393 310 ntBASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Chmp5Q9D7S9 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp5Q9D7S9 Gm12138-201ENSMUST00000122180 951 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms