Protein–RNA interactions for Protein: Q9D0R8

Lsm12, Protein LSM12 homolog, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm12Q9D0R8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm12Q9D0R8 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm12Q9D0R8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm12Q9D0R8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Lsm12Q9D0R8 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm12Q9D0R8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Lsm12Q9D0R8 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.96□□□□□ -0.49
Lsm12Q9D0R8 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.96□□□□□ -0.49
Lsm12Q9D0R8 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm12Q9D0R8 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm12Q9D0R8 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lsm12Q9D0R8 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Lsm12Q9D0R8 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
Lsm12Q9D0R8 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm12Q9D0R8 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm12Q9D0R8 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm12Q9D0R8 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Lsm12Q9D0R8 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm12Q9D0R8 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Lsm12Q9D0R8 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Gm12138-201ENSMUST00000122180 951 ntBASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Gm27847-201ENSMUST00000183711 107 ntBASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Gm27375-201ENSMUST00000183799 107 ntBASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Gm29705-201ENSMUST00000212598 474 ntBASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Lsm12Q9D0R8 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Gm24644-201ENSMUST00000157114 139 ntBASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Gm4271-201ENSMUST00000174444 973 ntBASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Lsm12Q9D0R8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms