Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ssbp3Q9D032 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Gm14130-201ENSMUST00000118417 987 ntBASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.23□□□□□ -0.77
Ssbp3Q9D032 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Gm9022-201ENSMUST00000182482 992 ntBASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Gm18304-201ENSMUST00000189162 546 ntBASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Gm8885-201ENSMUST00000189382 598 ntBASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Gm19087-201ENSMUST00000191430 946 ntBASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.23□□□□□ -0.77
Ssbp3Q9D032 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Gm26035-201ENSMUST00000083065 308 ntBASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ssbp3Q9D032 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Gm26361-201ENSMUST00000158868 186 ntBASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Gm44958-201ENSMUST00000203734 736 ntBASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ssbp3Q9D032 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms