Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Mospd4-201ENSMUST00000180618 576 ntBASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Gm27023-201ENSMUST00000182372 285 ntBASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.76□□□□□ -0.53
Khdc3Q9CWU5 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Gm4986-201ENSMUST00000119731 549 ntBASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Gm2546-201ENSMUST00000182630 991 ntBASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Gm18054-201ENSMUST00000207539 555 ntBASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Khdc3Q9CWU5 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Gm11793-201ENSMUST00000120433 981 ntBASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Gm23119-201ENSMUST00000158610 140 ntBASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Gm42627-201ENSMUST00000197347 224 ntBASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Gm10608-202ENSMUST00000213924 676 ntBASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Khdc3Q9CWU5 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms