Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.37□□□□□ -0.11
Smc3Q9CW03 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.37□□□□□ -0.11
Smc3Q9CW03 Gm13342-201ENSMUST00000121055 207 ntBASIC14.37□□□□□ -0.11
Smc3Q9CW03 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Gm39404-201ENSMUST00000216350 313 ntBASIC14.37□□□□□ -0.11
Smc3Q9CW03 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.37□□□□□ -0.11
Smc3Q9CW03 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc3Q9CW03 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.36□□□□□ -0.11
Smc3Q9CW03 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.36□□□□□ -0.11
Smc3Q9CW03 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.36□□□□□ -0.11
Smc3Q9CW03 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smc3Q9CW03 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Gm38273-201ENSMUST00000194987 2382 ntBASIC14.36□□□□□ -0.11
Smc3Q9CW03 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc3Q9CW03 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smc3Q9CW03 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.35□□□□□ -0.11
Smc3Q9CW03 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Gm5781-201ENSMUST00000219792 443 ntBASIC14.35□□□□□ -0.11
Smc3Q9CW03 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Smc3Q9CW03 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.34□□□□□ -0.11
Smc3Q9CW03 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc3Q9CW03 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.34□□□□□ -0.11
Smc3Q9CW03 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smc3Q9CW03 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smc3Q9CW03 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smc3Q9CW03 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms