Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chchd1Q9CQA6 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chchd1Q9CQA6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Gm15427-201ENSMUST00000117288 531 ntBASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Gm15240-201ENSMUST00000118156 720 ntBASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Gm12428-201ENSMUST00000119844 727 ntBASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Gm7862-201ENSMUST00000121461 292 ntBASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Gm43347-201ENSMUST00000200226 580 ntBASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Gm44882-201ENSMUST00000205702 802 ntBASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Gm18057-201ENSMUST00000208220 503 ntBASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Gm10060-201ENSMUST00000212002 111 ntBASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Gm15590-201ENSMUST00000078419 552 ntBASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Chchd1Q9CQA6 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Chchd1Q9CQA6 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Chchd1Q9CQA6 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.15□□□□□ -0.95
Chchd1Q9CQA6 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Chchd1Q9CQA6 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Chchd1Q9CQA6 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Chchd1Q9CQA6 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.15□□□□□ -0.95
Chchd1Q9CQA6 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Chchd1Q9CQA6 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Chchd1Q9CQA6 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Chchd1Q9CQA6 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Chchd1Q9CQA6 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.95
Chchd1Q9CQA6 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.15□□□□□ -0.95
Chchd1Q9CQA6 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Gm10339-203ENSMUST00000225409 1671 ntBASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Gpr146-202ENSMUST00000053120 1040 ntBASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Chchd1Q9CQA6 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms