Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Gm11597-201ENSMUST00000121423 964 ntBASIC11.57□□□□□ -0.56
Use1Q9CQ56 Gm1335-201ENSMUST00000121653 386 ntBASIC11.57□□□□□ -0.56
Use1Q9CQ56 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.57□□□□□ -0.56
Use1Q9CQ56 Gm4034-201ENSMUST00000187674 480 ntBASIC11.57□□□□□ -0.56
Use1Q9CQ56 Gm18584-201ENSMUST00000203098 964 ntBASIC11.57□□□□□ -0.56
Use1Q9CQ56 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Gm45925-201ENSMUST00000218882 744 ntBASIC11.57□□□□□ -0.56
Use1Q9CQ56 Gm45930-201ENSMUST00000221330 292 ntBASIC11.57□□□□□ -0.56
Use1Q9CQ56 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.57□□□□□ -0.56
Use1Q9CQ56 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Use1Q9CQ56 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Use1Q9CQ56 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Gm12502-201ENSMUST00000120197 444 ntBASIC11.56□□□□□ -0.56
Use1Q9CQ56 Gm13315-201ENSMUST00000120376 991 ntBASIC11.56□□□□□ -0.56
Use1Q9CQ56 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Gm43818-201ENSMUST00000200605 466 ntBASIC11.56□□□□□ -0.56
Use1Q9CQ56 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.56□□□□□ -0.56
Use1Q9CQ56 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Gm22058-201ENSMUST00000083393 310 ntBASIC11.56□□□□□ -0.56
Use1Q9CQ56 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Use1Q9CQ56 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.55□□□□□ -0.56
Use1Q9CQ56 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Gm44405-201ENSMUST00000198952 126 ntBASIC11.55□□□□□ -0.56
Use1Q9CQ56 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.55□□□□□ -0.56
Use1Q9CQ56 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms