Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Gm13369-201ENSMUST00000119442 987 ntBASIC11.59□□□□□ -0.55
Ska1Q9CPV1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Gm22331-201ENSMUST00000158066 136 ntBASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Gm22121-201ENSMUST00000175148 54 ntBASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Gm8652-201ENSMUST00000181363 964 ntBASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Gm27847-201ENSMUST00000183711 107 ntBASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Gm27375-201ENSMUST00000183799 107 ntBASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Gm4768-201ENSMUST00000206199 686 ntBASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.59□□□□□ -0.55
Ska1Q9CPV1 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ska1Q9CPV1 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ska1Q9CPV1 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm24231-201ENSMUST00000104315 133 ntBASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm24644-201ENSMUST00000157114 139 ntBASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm4271-201ENSMUST00000174444 973 ntBASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm29705-201ENSMUST00000212598 474 ntBASIC11.58□□□□□ -0.56
Ska1Q9CPV1 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm10146-201ENSMUST00000072739 309 ntBASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ska1Q9CPV1 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms