Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Olfr282-204ENSMUST00000215320 1573 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Gm13315-201ENSMUST00000120376 991 ntBASIC12.23□□□□□ -0.45
Trim33Q99PP7 Gm11597-201ENSMUST00000121423 964 ntBASIC12.23□□□□□ -0.45
Trim33Q99PP7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Mir1938-201ENSMUST00000158746 100 ntBASIC12.23□□□□□ -0.45
Trim33Q99PP7 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Gm6098-201ENSMUST00000180234 330 ntBASIC12.23□□□□□ -0.45
Trim33Q99PP7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Gm18935-201ENSMUST00000212692 664 ntBASIC12.23□□□□□ -0.45
Trim33Q99PP7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trim33Q99PP7 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Gm15074-201ENSMUST00000117603 936 ntBASIC12.22□□□□□ -0.45
Trim33Q99PP7 Gm13875-201ENSMUST00000120162 282 ntBASIC12.22□□□□□ -0.45
Trim33Q99PP7 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.22□□□□□ -0.45
Trim33Q99PP7 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.22□□□□□ -0.45
Trim33Q99PP7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim33Q99PP7 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim33Q99PP7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms