Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Cog3-203ENSMUST00000227473 4197 ntBASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Tlr3Q99MB1 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Tlr3Q99MB1 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Tlr3Q99MB1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Gm30285-201ENSMUST00000214614 422 ntBASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Tlr3Q99MB1 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Gm23912-201ENSMUST00000104687 87 ntBASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Gm14726-201ENSMUST00000120623 896 ntBASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tlr3Q99MB1 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms