Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm13888-201ENSMUST00000119148 422 ntBASIC10.77□□□□□ -0.69
Scrt1Q99M85 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Gm14832-201ENSMUST00000121289 322 ntBASIC10.77□□□□□ -0.69
Scrt1Q99M85 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.77□□□□□ -0.69
Scrt1Q99M85 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Gm32999-201ENSMUST00000192693 562 ntBASIC10.77□□□□□ -0.69
Scrt1Q99M85 Gm4607-201ENSMUST00000206649 577 ntBASIC10.77□□□□□ -0.69
Scrt1Q99M85 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.77□□□□□ -0.69
Scrt1Q99M85 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Scrt1Q99M85 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Scrt1Q99M85 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm44999-201ENSMUST00000207456 1493 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Scrt1Q99M85 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm12165-201ENSMUST00000117047 342 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm15515-201ENSMUST00000117827 822 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm29615-201ENSMUST00000185371 697 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm28224-201ENSMUST00000186078 697 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm29001-201ENSMUST00000186177 697 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm28292-201ENSMUST00000186593 697 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm28101-201ENSMUST00000187608 697 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm29076-201ENSMUST00000187689 697 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm28302-201ENSMUST00000187931 697 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm28646-201ENSMUST00000188220 697 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm28205-201ENSMUST00000189177 697 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm29032-201ENSMUST00000189797 697 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm28695-201ENSMUST00000190300 697 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm37448-201ENSMUST00000192795 697 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gm5369-201ENSMUST00000217499 588 ntBASIC10.76□□□□□ -0.69
Scrt1Q99M85 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Scrt1Q99M85 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.76□□□□□ -0.69
Scrt1Q99M85 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Scrt1Q99M85 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms