Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC12.9□□□□□ -0.34
Clp1Q99LI9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.9□□□□□ -0.34
Clp1Q99LI9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clp1Q99LI9 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.9□□□□□ -0.35
Clp1Q99LI9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.9□□□□□ -0.35
Clp1Q99LI9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Clp1Q99LI9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Clp1Q99LI9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Clp1Q99LI9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.89□□□□□ -0.35
Clp1Q99LI9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.89□□□□□ -0.35
Clp1Q99LI9 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm13183-201ENSMUST00000118615 789 ntBASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm11340-201ENSMUST00000119226 412 ntBASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm10731-201ENSMUST00000181171 448 ntBASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm29499-201ENSMUST00000189151 486 ntBASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm28329-201ENSMUST00000191208 689 ntBASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm29171-201ENSMUST00000191397 486 ntBASIC12.89□□□□□ -0.35
Clp1Q99LI9 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm37028-201ENSMUST00000194276 107 ntBASIC12.89□□□□□ -0.35
Clp1Q99LI9 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.89□□□□□ -0.35
Clp1Q99LI9 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.89□□□□□ -0.35
Clp1Q99LI9 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Clp1Q99LI9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Clp1Q99LI9 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.88□□□□□ -0.35
Clp1Q99LI9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.88□□□□□ -0.35
Clp1Q99LI9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Clp1Q99LI9 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm23958-201ENSMUST00000157207 105 ntBASIC12.88□□□□□ -0.35
Clp1Q99LI9 Mir1956-201ENSMUST00000157748 65 ntBASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Clp1Q99LI9 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms