Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Gm15824-201ENSMUST00000119516 955 ntBASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Gm27023-201ENSMUST00000182372 285 ntBASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Gm39404-201ENSMUST00000216350 313 ntBASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cstf3Q99LI7 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cstf3Q99LI7 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cstf3Q99LI7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cstf3Q99LI7 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cstf3Q99LI7 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms