Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.16□□□□□ -0.62
Lims1Q99JW4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.16□□□□□ -0.62
Lims1Q99JW4 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.16□□□□□ -0.62
Lims1Q99JW4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Lims1Q99JW4 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.15□□□□□ -0.62
Lims1Q99JW4 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.15□□□□□ -0.62
Lims1Q99JW4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Gm8738-201ENSMUST00000172606 329 ntBASIC11.15□□□□□ -0.62
Lims1Q99JW4 Gm3890-201ENSMUST00000182416 207 ntBASIC11.15□□□□□ -0.62
Lims1Q99JW4 Gm43818-201ENSMUST00000200605 466 ntBASIC11.15□□□□□ -0.62
Lims1Q99JW4 Gm5781-201ENSMUST00000219792 443 ntBASIC11.15□□□□□ -0.62
Lims1Q99JW4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.15□□□□□ -0.62
Lims1Q99JW4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.15□□□□□ -0.62
Lims1Q99JW4 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Lims1Q99JW4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lims1Q99JW4 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lims1Q99JW4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lims1Q99JW4 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.63
Lims1Q99JW4 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lims1Q99JW4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.15□□□□□ -0.63
Lims1Q99JW4 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Lims1Q99JW4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Lims1Q99JW4 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.14□□□□□ -0.63
Lims1Q99JW4 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.14□□□□□ -0.63
Lims1Q99JW4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.14□□□□□ -0.63
Lims1Q99JW4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Gm7809-201ENSMUST00000153199 742 ntBASIC11.14□□□□□ -0.63
Lims1Q99JW4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.14□□□□□ -0.63
Lims1Q99JW4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms