Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rfc4Q99J62 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.09□□□□□ -0.15
Rfc4Q99J62 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Gm11509-201ENSMUST00000117358 325 ntBASIC14.09□□□□□ -0.15
Rfc4Q99J62 Gm11511-201ENSMUST00000118146 540 ntBASIC14.09□□□□□ -0.15
Rfc4Q99J62 Gm7722-201ENSMUST00000120646 741 ntBASIC14.09□□□□□ -0.15
Rfc4Q99J62 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Gm9463-201ENSMUST00000206707 601 ntBASIC14.09□□□□□ -0.15
Rfc4Q99J62 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.09□□□□□ -0.15
Rfc4Q99J62 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rfc4Q99J62 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfc4Q99J62 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfc4Q99J62 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rfc4Q99J62 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.08□□□□□ -0.15
Rfc4Q99J62 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rfc4Q99J62 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.08□□□□□ -0.16
Rfc4Q99J62 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Gm26286-201ENSMUST00000104166 134 ntBASIC14.08□□□□□ -0.16
Rfc4Q99J62 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Rprl1-201ENSMUST00000158050 327 ntBASIC14.08□□□□□ -0.16
Rfc4Q99J62 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Gm27530-201ENSMUST00000184096 98 ntBASIC14.08□□□□□ -0.16
Rfc4Q99J62 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Gm28686-201ENSMUST00000187404 609 ntBASIC14.08□□□□□ -0.16
Rfc4Q99J62 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rfc4Q99J62 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rfc4Q99J62 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.08□□□□□ -0.16
Rfc4Q99J62 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.08□□□□□ -0.16
Rfc4Q99J62 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rfc4Q99J62 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms