Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip1Q922J3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Clip1Q922J3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Clip1Q922J3 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC19.05■□□□□ 0.64
Clip1Q922J3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clip1Q922J3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC19.04■□□□□ 0.64
Clip1Q922J3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC19.04■□□□□ 0.64
Clip1Q922J3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC19.04■□□□□ 0.64
Clip1Q922J3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 Gm43447-201ENSMUST00000198471 1535 ntBASIC19.04■□□□□ 0.64
Clip1Q922J3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Clip1Q922J3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Clip1Q922J3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC19.04■□□□□ 0.64
Clip1Q922J3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC19.04■□□□□ 0.64
Clip1Q922J3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC19.04■□□□□ 0.64
Clip1Q922J3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC19.04■□□□□ 0.64
Clip1Q922J3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 Gm44980-201ENSMUST00000205826 314 ntBASIC19.04■□□□□ 0.64
Clip1Q922J3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Clip1Q922J3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC19.04■□□□□ 0.64
Clip1Q922J3 Gm6189-201ENSMUST00000164487 2082 ntBASIC19.04■□□□□ 0.64
Clip1Q922J3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clip1Q922J3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Clip1Q922J3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Clip1Q922J3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip1Q922J3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip1Q922J3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip1Q922J3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Clip1Q922J3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Clip1Q922J3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Clip1Q922J3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Clip1Q922J3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC19.03■□□□□ 0.64
Clip1Q922J3 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip1Q922J3 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip1Q922J3 Gm38042-201ENSMUST00000191614 5208 ntBASIC19.03■□□□□ 0.64
Clip1Q922J3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Clip1Q922J3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip1Q922J3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip1Q922J3 n-R5s64-201ENSMUST00000102019 119 ntBASIC19.03■□□□□ 0.64
Clip1Q922J3 Gm13916-201ENSMUST00000117368 628 ntBASIC19.03■□□□□ 0.64
Clip1Q922J3 Gm15207-201ENSMUST00000119259 442 ntBASIC19.03■□□□□ 0.64
Clip1Q922J3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Clip1Q922J3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC19.03■□□□□ 0.64
Clip1Q922J3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clip1Q922J3 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip1Q922J3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip1Q922J3 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Clip1Q922J3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip1Q922J3 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Clip1Q922J3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC19.03■□□□□ 0.64
Clip1Q922J3 Gm37437-201ENSMUST00000194451 1937 ntBASIC19.03■□□□□ 0.64
Clip1Q922J3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clip1Q922J3 Gm5780-201ENSMUST00000217774 1834 ntBASIC19.03■□□□□ 0.64
Clip1Q922J3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clip1Q922J3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Clip1Q922J3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clip1Q922J3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clip1Q922J3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Clip1Q922J3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Clip1Q922J3 AC169511.2-201ENSMUST00000226674 2063 ntBASIC19.02■□□□□ 0.64
Clip1Q922J3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clip1Q922J3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Clip1Q922J3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clip1Q922J3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC19.02■□□□□ 0.64
Clip1Q922J3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clip1Q922J3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clip1Q922J3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clip1Q922J3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clip1Q922J3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clip1Q922J3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clip1Q922J3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Clip1Q922J3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clip1Q922J3 Gm22920-201ENSMUST00000102175 109 ntBASIC19.02■□□□□ 0.64
Clip1Q922J3 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clip1Q922J3 Gm13328-201ENSMUST00000120816 1020 ntBASIC19.02■□□□□ 0.64
Clip1Q922J3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Clip1Q922J3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC19.02■□□□□ 0.64
Clip1Q922J3 Mir7076-201ENSMUST00000183519 74 ntBASIC19.02■□□□□ 0.64
Clip1Q922J3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC19.02■□□□□ 0.64
Clip1Q922J3 Gm5852-201ENSMUST00000194119 1021 ntBASIC19.02■□□□□ 0.64
Clip1Q922J3 Gm5542-201ENSMUST00000195485 1089 ntBASIC19.02■□□□□ 0.64
Clip1Q922J3 Gm44270-201ENSMUST00000203084 1234 ntBASIC19.02■□□□□ 0.64
Clip1Q922J3 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC19.02■□□□□ 0.64
Clip1Q922J3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
Clip1Q922J3 Gm5537-201ENSMUST00000091117 1252 ntBASIC19.02■□□□□ 0.64
Clip1Q922J3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms