Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Gm11222-201ENSMUST00000119005 738 ntBASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.71□□□□□ -0.37
Pcdhb1Q91Y08 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Pck2-205ENSMUST00000226352 2784 ntBASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdhb1Q91Y08 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Gm12241-201ENSMUST00000118330 726 ntBASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Rprl1-201ENSMUST00000158050 327 ntBASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Gm30285-201ENSMUST00000214614 422 ntBASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Gm19994-201ENSMUST00000217086 586 ntBASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Gm7399-201ENSMUST00000032395 858 ntBASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdhb1Q91Y08 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb1Q91Y08 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms