Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Gm14465-201ENSMUST00000120603 567 ntBASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Gm26914-201ENSMUST00000182262 223 ntBASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Gm27572-201ENSMUST00000183702 255 ntBASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Gm42693-201ENSMUST00000196779 631 ntBASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Gm43478-201ENSMUST00000200381 292 ntBASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 AC166830.1-201ENSMUST00000224201 533 ntBASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Zwilch-211ENSMUST00000176794 1746 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Tmod2-203ENSMUST00000164100 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb20Q91XZ9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Gm37953-201ENSMUST00000195293 1884 ntBASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 AC154552.6-201ENSMUST00000221365 1342 ntBASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Gm14200-201ENSMUST00000122256 192 ntBASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Gm22275-201ENSMUST00000122470 310 ntBASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Gm27715-201ENSMUST00000184714 260 ntBASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Gm8521-201ENSMUST00000190394 606 ntBASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Gm38254-201ENSMUST00000192276 1009 ntBASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Gm6680-201ENSMUST00000192789 950 ntBASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Gm18529-201ENSMUST00000193025 1257 ntBASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Gm43049-201ENSMUST00000198099 462 ntTSL 3 BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 AC102689.1-201ENSMUST00000220511 1090 ntBASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 AC154417.1-201ENSMUST00000223876 476 ntBASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 AC132833.3-201ENSMUST00000227472 866 ntBASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Myl1-201ENSMUST00000027151 1082 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Olfr1120-201ENSMUST00000058737 1018 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhb20Q91XZ9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb20Q91XZ9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.46□□□□□ -0.42
Pcdhb20Q91XZ9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms