Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gm8738-201ENSMUST00000172606 329 ntBASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gm3890-201ENSMUST00000182416 207 ntBASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gm44124-201ENSMUST00000204159 472 ntBASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gm45930-201ENSMUST00000221330 292 ntBASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdhga3Q91XY5 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Rmrp-201ENSMUST00000157463 271 ntBASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Gm37008-201ENSMUST00000195712 319 ntBASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdhga3Q91XY5 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Pcdhga3Q91XY5 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms