Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Gm44958-201ENSMUST00000203734 736 ntBASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.26□□□□□ -0.77
H1fooQ8VIK3 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
H1fooQ8VIK3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Gm11434-201ENSMUST00000122379 629 ntBASIC10.25□□□□□ -0.77
H1fooQ8VIK3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Snora78-201ENSMUST00000158630 128 ntBASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Gm27514-201ENSMUST00000183692 110 ntBASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Gm4034-201ENSMUST00000187674 480 ntBASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Gm37201-201ENSMUST00000191845 523 ntBASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Gm39404-201ENSMUST00000216350 313 ntBASIC10.25□□□□□ -0.77
H1fooQ8VIK3 AC153961.1-201ENSMUST00000217760 385 ntBASIC10.25□□□□□ -0.77
H1fooQ8VIK3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.25□□□□□ -0.77
H1fooQ8VIK3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
H1fooQ8VIK3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms