Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdh18Q8VHR0 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pcdh18Q8VHR0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pcdh18Q8VHR0 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pcdh18Q8VHR0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Gm11424-201ENSMUST00000121929 829 ntBASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Gm6745-201ENSMUST00000199216 526 ntBASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Gm45384-201ENSMUST00000210451 277 ntBASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdh18Q8VHR0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdh18Q8VHR0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms