Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retreg1dQ8VE91 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Gm12997-201ENSMUST00000120207 640 ntBASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Gm15276-201ENSMUST00000145953 498 ntBASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Gm3096-201ENSMUST00000185770 364 ntBASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Gm38317-201ENSMUST00000195564 343 ntBASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Gm13097-201ENSMUST00000210722 397 ntBASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Gm8712-201ENSMUST00000221090 701 ntBASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.18□□□□□ -0.46
Retreg1dQ8VE91 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Gm14999-201ENSMUST00000121039 624 ntBASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retreg1dQ8VE91 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms