Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Gm8385-201ENSMUST00000058999 643 ntBASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ndc1Q8VCB1 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Gm42937-201ENSMUST00000197360 752 ntBASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Gm18753-201ENSMUST00000201000 566 ntBASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ndc1Q8VCB1 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Matn2-203ENSMUST00000226766 3252 ntBASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Gm12015-201ENSMUST00000117065 843 ntBASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Gm13996-201ENSMUST00000118456 430 ntBASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Gm9022-201ENSMUST00000182482 992 ntBASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ndc1Q8VCB1 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms