Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Gm26035-201ENSMUST00000083065 308 ntBASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdt1Q8R4E9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Gm26361-201ENSMUST00000158868 186 ntBASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Gm16296-201ENSMUST00000159905 325 ntBASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Gm44405-201ENSMUST00000198952 126 ntBASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Gm44262-201ENSMUST00000204969 372 ntBASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Gm5950-201ENSMUST00000213337 772 ntBASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Gm45925-201ENSMUST00000218882 744 ntBASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdt1Q8R4E9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdt1Q8R4E9 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdt1Q8R4E9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Cdt1Q8R4E9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cdt1Q8R4E9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdt1Q8R4E9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Gm15547-201ENSMUST00000122152 333 ntBASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Gm25732-201ENSMUST00000175168 60 ntBASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Gm8385-201ENSMUST00000058999 643 ntBASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdt1Q8R4E9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms