Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf4Q8K4J2 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf4Q8K4J2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Ebf4Q8K4J2 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf4Q8K4J2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf4Q8K4J2 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf4Q8K4J2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf4Q8K4J2 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ebf4Q8K4J2 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ebf4Q8K4J2 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.13□□□□□ -0.63
Ebf4Q8K4J2 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf4Q8K4J2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf4Q8K4J2 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ebf4Q8K4J2 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Gm22121-201ENSMUST00000175148 54 ntBASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Gm20445-201ENSMUST00000061905 565 ntBASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ebf4Q8K4J2 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Gm15371-201ENSMUST00000117057 784 ntBASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Gm29667-201ENSMUST00000190817 490 ntBASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Gm44397-201ENSMUST00000195950 113 ntBASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.11□□□□□ -0.63
Ebf4Q8K4J2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms