Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Gm14726-201ENSMUST00000120623 896 ntBASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Gm23119-201ENSMUST00000158610 140 ntBASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Gm30285-201ENSMUST00000214614 422 ntBASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Rfwd3Q8CIK8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Gm44364-201ENSMUST00000198368 141 ntBASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Gm43822-201ENSMUST00000200285 476 ntBASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rfwd3Q8CIK8 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.52□□□□□ -0.56
Rfwd3Q8CIK8 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rfwd3Q8CIK8 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Rfwd3Q8CIK8 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.52□□□□□ -0.56
Rfwd3Q8CIK8 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rfwd3Q8CIK8 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rfwd3Q8CIK8 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Rfwd3Q8CIK8 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rfwd3Q8CIK8 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rfwd3Q8CIK8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rfwd3Q8CIK8 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rfwd3Q8CIK8 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rfwd3Q8CIK8 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Rfwd3Q8CIK8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rfwd3Q8CIK8 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Rfwd3Q8CIK8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.52□□□□□ -0.57
Rfwd3Q8CIK8 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rfwd3Q8CIK8 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms