Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Mir7070-201ENSMUST00000183657 86 ntBASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Gm31256-201ENSMUST00000194705 506 ntBASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup88Q8CEC0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Gm23363-201ENSMUST00000175024 79 ntBASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Gm5950-201ENSMUST00000213337 772 ntBASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup88Q8CEC0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.43□□□□□ -0.1
Nup88Q8CEC0 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Gm13097-201ENSMUST00000210722 397 ntBASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Gm5363-201ENSMUST00000211927 938 ntBASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nup88Q8CEC0 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup88Q8CEC0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms