Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lysmd4Q8CC84 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Gm11918-201ENSMUST00000121660 179 ntBASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Gm17794-201ENSMUST00000220252 955 ntBASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lysmd4Q8CC84 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lysmd4Q8CC84 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lysmd4Q8CC84 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Lysmd4Q8CC84 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lysmd4Q8CC84 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Lysmd4Q8CC84 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lysmd4Q8CC84 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lysmd4Q8CC84 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Lysmd4Q8CC84 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lysmd4Q8CC84 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Gm12314-201ENSMUST00000118104 538 ntBASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Gm24196-201ENSMUST00000179161 110 ntBASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Gm6007-201ENSMUST00000208170 823 ntBASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lysmd4Q8CC84 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Lysmd4Q8CC84 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms